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Modelling photosynthesis-irradiance curves: effects of temperature, dissolved silica depletion and changing community assemblage on community photosynthesis

机译:模拟光合作用-辐照度曲线:温度,溶解硅耗竭和改变群落组成对群落光合作用的影响

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摘要

Sets of photosynthesis-irradiance (P-I) curves yield more information about community photosynthesis when analyzed with proper models in mind. Based on ecosystem-specific considerations regarding the factors that explain spatial and temporal patterns of photosynthesis, theWebb model of photosynthesis can be extended and fitted to P-I data. We propose a method based on a series of nested models of increasing complexity to test whether supposed effects of environmental factors are reflected in the P-I data, whether more complex models fit the data significantly better than more simple models, and whether parameters describing the presumed dependencies can be estimated from the data set. We compare a direct approach, fitting the extended model to all P-I data at once, with a two-step approach in which photosynthetic efficiencies and maximum photosynthetic rates of individual P-I curves are determined first, and then related to environmental variables. A nested model approach prevents overfitting of multiparameter models. Monte Carlo analysis sheds light on the error structure of the model, by separating parameter and model uncertainty, and provides an assessment of the performance of the formulations used in ecosystem models. We demonstrate that the two-step approach underperforms when used to compute photosynthetic rates. We apply the proposed method to an extensive P-I data set from the Schelde estuary, where spatiotemporal patterns of photosynthesis arise from a combination of seasonality, silica depletion, phytoplankton community composition, and salinity effects.
机译:使用适当的模型进行分析时,多组光合作用-辐照度(P-I)曲线可提供有关社区光合作用的更多信息。基于生态系统特定的考虑因素,这些因素可以解释光合作用的时空格局,因此可以扩展Webb光合作用模型并将其拟合到P-I数据。我们提出了一种基于一系列复杂度不断增加的嵌套模型的方法,以测试环境因素的假设影响是否在PI数据中得到反映,更复杂的模型是否比简单模型更适合数据,以及是否描述了假定的依赖性的参数可以从数据集中进行估算。我们比较了直接方法,即同时将扩展模型与所有P-I数据拟合,采用两步法,其中首先确定各个P-I曲线的光合效率和最大光合速率,然后将其与环境变量相关联。嵌套模型方法可防止对多参数模型进行过度拟合。蒙特卡洛分析通过分离参数和模型不确定性来阐明模型的误差结构,并评估生态系统模型中使用的制剂的性能。我们证明了当用于计算光合速率时,两步法的性能不佳。我们将提出的方法应用于来自Schelde河口的大量P-I数据集,其中光合作用的时空模式是由季节性,二氧化硅损耗,浮游植物群落组成和盐度效应的组合引起的。

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